Quantitative peptidomics for discovery of circadian-related peptides from the rat suprachiasmatic nucleus

Title
Quantitative peptidomics for discovery of circadian-related peptides from the rat suprachiasmatic nucleus
Authors
이지은Leonid ZamdborgBruce R. SoutheyNorman Atkins, Jr.Jennifer W. MitchellMingxi LiMartha U. GilletteNeil L. KelleherJonathan V. Sweedler
Keywords
circadian rhythms; suprachiasmatic nucleus (SCN); neuropeptides; endogenous peptides; label-free quantification; quantitative peptidomic analysis
Issue Date
2013-02
Publisher
Journal of proteome research
Citation
VOL 12, NO 2, 585-593
Abstract
In mammals the suprachiasmatic nucleus (SCN), the master circadian clock, is sensitive to light input via the optic chiasm and synchronizes many daily biological rhythms. Here we explore variations in the expression levels of neuropeptides present in the SCN of rats using a label-free quantification approach that is based on integrating peak intensities between daytime, Zeitgeber time (ZT) 6, and nighttime, ZT 18. From nine analyses comparing the levels between these two time points, 10 endogenous peptides derived from eight prohormones exhibited significant differences in their expression levels (adjusted p-value <0.05). Of these, seven peptides derived from six prohormones, including GRP, PACAP, and CART, exhibited ≥30% increases at ZT 18, and the VGRPEWWMDYQ peptide derived from proenkephalin A showed a >50% increase at nighttime. Several endogenous peptides showing statistically significant changes in this study have not been previously reported to alter their levels as a function of time of day, nor have they been implicated in prior functional SCN studies. This information on peptide expression changes serves as a resource for discovering unknown peptide regulators that affect circadian rhythms in the SCN.
URI
http://pubs.kist.re.kr/handle/201004/46088
ISSN
15353893
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KIST Publication > Article
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