Hydrogen bonding abilities of thioamide
- Authors
- Lee, HJ; Choi, YS; Lee, KB; Park, J; Yoon, CJ
- Issue Date
- 2002-08-01
- Publisher
- AMER CHEMICAL SOC
- Citation
- JOURNAL OF PHYSICAL CHEMISTRY A, v.106, no.30, pp.7010 - 7017
- Abstract
- The strengths of hydrogen bonding interaction between formamide (FA) and thioformamide (TFA) were investigated at the B3LYP level with the 6-311G(d,p), 6-31+G(d,p), and 6-311++G(2d,2p) basis sets. The 18 minimum energy structures of FA-FA, TFA-TFA, and TFA-FA dimers were examined. The average strength of the OCN-H---O=C, SCN-H---S=C, OCN-H---S=C, and SCN-H---O=C hydrogen bonds at the B3LYP/6-311++G(2d,2p) level was -6.1 +/- 0.3, -5.0 +/- 0.1, -4.8 +/- 0.3, and -7.3 +/- 0.4 kcal/mol, respectively, when the basis set superposition error (BSSE) was corrected. The results show that TFA is a good hydrogen bond donor but a poor hydrogen bond acceptor as compared to FA. For the OC-H---O=C, SC-H---S=C, OC-H---S=C, and SC-H---O=C hydrogen bonds, the average strength has been predicted to be -2.2 +/- 0.3, -2.2 +/- 0.2, -1.0 +/- 0.3, and -3.1 +/- 0.3 kcal/mol, respectively. It is remarkable that the thioformyl hydrogen atom of TFA has a strong hydrogen bonding ability as compared to that of FA. The abilities of the hydrogen bond donor have a good correlation with the proton affinities of the deprotonated anion.
- Keywords
- CENTER-DOT-O; DENSITY-FUNCTIONAL THEORY; AB-INITIO CALCULATIONS; AMIDE-AMIDE; CONFORMATIONAL-ANALYSIS; ROTATIONAL BARRIERS; BETA-SHEET; THIOACYLATING AGENTS; N-METHYLACETAMIDE; TOTAL ENERGIES; CENTER-DOT-O; DENSITY-FUNCTIONAL THEORY; AB-INITIO CALCULATIONS; AMIDE-AMIDE; CONFORMATIONAL-ANALYSIS; ROTATIONAL BARRIERS; BETA-SHEET; THIOACYLATING AGENTS; N-METHYLACETAMIDE; TOTAL ENERGIES; Hydrogen bonding; Thioacetamide; Molecular Dynamics
- ISSN
- 1089-5639
- URI
- https://pubs.kist.re.kr/handle/201004/139295
- DOI
- 10.1021/jp025516e
- Appears in Collections:
- KIST Article > 2002
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